CPE 101: Fundamentals of Computer Science I
Lab 12

Executables

icomplement-alex icomplement-alex-unix1 executables for icomplement.c program
dna2amino-alex dna2amino-alex-unix1 executables for dna2amino.c program
palindrome-alex palindrome-alex-unix1 executables for palindrome.c program
gcp-alex gcp-alex-unix1 executables for gcp.c program
consensus-alex consensus-alex-unix1 executables for consensus.c program
geneSearch-alex geneSearch-alex-unix1 executables for geneSearch.c program

Test Data

icomplement.c, dna2ppm.c, palindrom.c

dna-tests.tar.gzall tests
dna-test01
dna-test02
dna-test03
dna-test04
dna-test05
dna-test06
dna-test07
dna-test08
dna-test09
dna-test10

Real Data

This data comes from various on-line genome sequence databases

icomplement.c, dna2ppm.c, palindrom.c

Fragments of influenza A (H1N1) virus.

dna-fragments.tar.gzall tests
dna-fragment01
dna-fragment02
dna-fragment03
dna-fragment04
dna-fragment05
dna-fragment06
dna-fragment07
dna-fragment08
dna-fragment09
dna-fragment10

Extra data for geneSearch.c
genetests.zipall tests
genetest01
genetest02
genetest03
genetest04
genetest05

Data for consensus.c

seq-tests.tar.gzall tests
seq-test04
seq-test05
seq-test06
seq-test07
seq-test08
seq-test09
seq-test10

February 27, 2012 dekhtyar at calpoly.edu